Difference between revisions of "Favorite Knowledgebase"

From Bioinformatics Lab
Jump to: navigation, search
 
(2 intermediate revisions by one user not shown)
Line 1: Line 1:
 
== Variome ==
 
== Variome ==
*[http://www.nature.com Nature]
 
  
 
== Transcriptome ==
 
== Transcriptome ==
*[http://www.nature.com Nature]
+
*[http://www.ncbi.nlm.nih.gov/geo/ GEO]
 +
*[http://www.ebi.ac.uk/arrayexpress/ Arrayexpress]
  
 
== Proteome ==
 
== Proteome ==
*[http://www.nature.com Nature]
 
  
 
== Metabolome ==
 
== Metabolome ==
*[http://www.nature.com Nature]
 
  
 
== Phenome ==
 
== Phenome ==
*[http://www.nature.com Nature]
+
*[http://www.ncbi.nlm.nih.gov/omim OMIM]
  
 
== Genotype-to-phenotype map ==
 
== Genotype-to-phenotype map ==
*[http://www.nature.com Nature]
+
*[http://www.genome.gov/gwastudies/ GWAS catalog]
  
 
== Interactome/Network ==
 
== Interactome/Network ==
*[http://www.nature.com Nature]
+
*[http://code.google.com/p/psicquic/ Protemic Standard Initiative Common QUery InterfaCe (PSICQUIC)]
 +
*[http://www.imexconsortium.org/ International Molecular Exchange Consortium (IMEx)]
 +
*[http://www.hprd.org/ Human Protein Reference Database (HPRD)]
  
 
== TF/miRNA ==
 
== TF/miRNA ==
*[http://www.nature.com Nature]
 
  
 
== Chemical/Drug ==
 
== Chemical/Drug ==
*[http://www.nature.com Nature]
+
*[http://pubchem.ncbi.nlm.nih.gov/ PubChem]
  
 
== Ontology/Pathway ==
 
== Ontology/Pathway ==
*[http://www.nature.com Nature]
+
*[http://www.geneontology.org/ Gene Ontology]
 +
*[http://biocyc.org/ Biocyc]
  
 
== Bacterial genomes ==
 
== Bacterial genomes ==
*[http://www.nature.com Nature]
+
*[http://www.pseudomonas.com/ Pseudomonas Genome Database]
  
 
== Fungal genomes ==
 
== Fungal genomes ==
*[http://www.nature.com Nature]
+
*[http://www.yeastgenome.org/ Saccharomyces Genome Database]
 +
*[http://www.candidagenome.org/ Candida Genome Database]  
  
 
== Animal genomes ==
 
== Animal genomes ==
*[http://www.nature.com Nature]
+
*[http://www.wormbase.org/ WormBase]
 +
*[http://flybase.org/ FlyBase]
 +
*[http://www.informatics.jax.org/ MGI]
  
 
== Plant genomes ==
 
== Plant genomes ==
*[http://www.nature.com Nature]
+
*[http://5e.plantphys.net/index.php Plant Physiology web]
 +
*[http://www.arabidopsis.org/ TAIR]
 +
*[http://www.gramene.org/ Gramene]
 +
*[http://www.maizegdb.org/ MaizeGDB]  
  
 
== Metagenomes ==
 
== Metagenomes ==
*[http://www.nature.com Nature]
 
  
 
== Stem Cells ==
 
== Stem Cells ==
*[http://www.nature.com Nature]
 
  
 
== Others ==
 
== Others ==
*[http://www.nature.com Nature]
 

Latest revision as of 16:55, 23 July 2011

Contents

[edit] Variome

[edit] Transcriptome

[edit] Proteome

[edit] Metabolome

[edit] Phenome

[edit] Genotype-to-phenotype map

[edit] Interactome/Network

[edit] TF/miRNA

[edit] Chemical/Drug

[edit] Ontology/Pathway

[edit] Bacterial genomes

[edit] Fungal genomes

[edit] Animal genomes

[edit] Plant genomes

[edit] Metagenomes

[edit] Stem Cells

[edit] Others

Personal tools
Namespaces

Variants
Actions
Navigation
Toolbox