Difference between revisions of "Favorite Knowledgebase"

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== PPI DB ==
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== Variome ==
*[http://www.nature.com Nature]
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== Transcriptome ==
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*[http://www.ncbi.nlm.nih.gov/geo/ GEO]
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*[http://www.ebi.ac.uk/arrayexpress/ Arrayexpress]
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== Proteome ==
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== Metabolome ==
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== Phenome ==
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*[http://www.ncbi.nlm.nih.gov/omim OMIM]
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== Genotype-to-phenotype map ==
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*[http://www.genome.gov/gwastudies/ GWAS catalog]
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== Interactome/Network ==
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*[http://code.google.com/p/psicquic/ Protemic Standard Initiative Common QUery InterfaCe (PSICQUIC)]
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*[http://www.imexconsortium.org/ International Molecular Exchange Consortium (IMEx)]
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*[http://www.hprd.org/ Human Protein Reference Database (HPRD)]
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== TF/miRNA ==
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== Chemical/Drug ==
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*[http://pubchem.ncbi.nlm.nih.gov/ PubChem]
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== Ontology/Pathway ==
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*[http://www.geneontology.org/ Gene Ontology]
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*[http://biocyc.org/ Biocyc]
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== Bacterial genomes ==
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*[http://www.pseudomonas.com/ Pseudomonas Genome Database]
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== Fungal genomes ==
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*[http://www.yeastgenome.org/ Saccharomyces Genome Database]
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*[http://www.candidagenome.org/ Candida Genome Database]
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== Animal genomes ==
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*[http://www.wormbase.org/ WormBase]
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*[http://flybase.org/ FlyBase]
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*[http://www.informatics.jax.org/ MGI]
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== Plant genomes ==
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*[http://5e.plantphys.net/index.php Plant Physiology web]
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*[http://www.arabidopsis.org/ TAIR]
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*[http://www.gramene.org/ Gramene]
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*[http://www.maizegdb.org/ MaizeGDB]
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== Metagenomes ==
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== Stem Cells ==
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== Others ==

Latest revision as of 16:55, 23 July 2011

Contents

[edit] Variome

[edit] Transcriptome

[edit] Proteome

[edit] Metabolome

[edit] Phenome

[edit] Genotype-to-phenotype map

[edit] Interactome/Network

[edit] TF/miRNA

[edit] Chemical/Drug

[edit] Ontology/Pathway

[edit] Bacterial genomes

[edit] Fungal genomes

[edit] Animal genomes

[edit] Plant genomes

[edit] Metagenomes

[edit] Stem Cells

[edit] Others

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