Difference between revisions of "Services"

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(JiffyNet: A gene network inference server for newly sequenced species)
(TRRUST: a reference database of human transcriptional regulatory interactions)
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[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
 
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
  
=='''TRRUST: a reference database of human transcriptional regulatory interactions'''==
+
=='''A reference database of human TF-target interactions'''==
 
[[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
 
[[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.

Revision as of 20:43, 21 October 2015

Organism-specific network-assisted hypothesis generation servers

Animal

MouseNetLogo.png WormNetv3.jpg Flynet.png Tools HumanNetLogo.jpg
Mus musculus Caenorhabditis elegans Drosophila melanogaster Homo sapiens

Plant

Aranet v2.jpg RiceNetv2 logo.png
Arabidopsis thaliana Oryza sativa

Microbe

EcoliNet.png Tools YesatNetLogo.jpg CryptoNet.png
Escherichia coli Saccharomyces cerevisiae Cryptococcus neoformans

Network-assisted Gene Set Analysis (human only)

Cover title riddle.jpg RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

Network-assisted prediction of disease pathways in model organisms

Logo morphin.png Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.

Instant gene network building server for newly sequenced species

Jiffynetlogo4 small.jpg Jiffy (instant) gene network modeler for newly sequenced species

A reference database of human TF-target interactions

TRRUST logo.jpg TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.

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