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Revision as of 21:24, 18 March 2015
Genome-scale gene networks
Bacteria
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| Escherichia coli | Cryptococcus neoformans |
Fungi
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| Saccharomyces cerevisiae |
Plant
|
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| Arabidopsis thaliana | Oryza sativa |
Animal
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| Caenorhabditis elegans | Homo sapiens |
RIDDLE: for network-assisted Gene Set Analysis
RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
MORPHIN: to study human diseases based on model organism pathways
Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
JiffNet: to construct gene network for newly sequenced species
Jiffy (instant) gene network modeler for newly sequenced species
