Software

From Network Biology Lab
Jump to: navigation, search

Co-functional networks and hypothesis generation servers

Human and Animals

Tools HumanNetLogo.jpg MouseNetLogo.png Danionet logo.png Flynet.png WormNetv3.jpg
Homo sapiens Mus musculus Danio rerio Drosophila melanogaster Caenorhabditis elegans

Plants

Aranet v2.jpg RiceNetv2 logo.png Soynetlogo.png Tomatonet logo.png WheatNet logo.png
Arabidopsis thaliana Oryza sativa Glycine max Solanum lycopersicum Triticum aestivum

Fungi

Tools YesatNetLogo.jpg CryptoNet.png
Saccharomyces cerevisiae Cryptococcus neoformans

Bacteria

Pseudomonas logo.jpg EcoliNet.png XooNet logo.png
Pseudomonas aeruginosa Escherichia coli Xanthomonas oryzae pv. oryzae



Build your co-functional networks for all other species

Jiffynetlogo4 small.jpg JiffyNet: Instant gene network building server for newly sequenced species



Network-based servers for Disease Research

Coexpedia.png COEXPEDIA: Exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH)


GWAB logo.png GWAB: A web server for network-based boosting of human genome-wide association data


Cover title muffinn.png MUFFINN: Cancer gene discovery via network analysis of somatic mutation data


Logo morphin.png MORPHIN: Network-assisted prediction of disease pathways in model organisms




Other Network Biology tools

TRRUST logo.jpg TRRUST: A reference database of human TF-target interactions


Cover title riddle.jpg RIDDLE: Network-assisted Gene Set Analysis (human only)




Domain-based PPI networks by Weighted Mutual Information (WMI)

Project Page

Personal tools
Namespaces

Variants
Actions
Navigation
Toolbox