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(Genome-scale gene networks for various species)
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=='''Genome-scale gene networks'''==
 
=='''Genome-scale gene networks'''==
 
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==Microbes==
==Bacteria==
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{|border="0"  width="600"
{|border="0"  width="400"
 
 
|align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]]
 
|align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]]
 
|align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]]
 
|align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]]
 +
|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
 
|-
 
|-
 
|align="center"|''Escherichia coli''
 
|align="center"|''Escherichia coli''
 
|align="center"|''Cryptococcus neoformans''
 
|align="center"|''Cryptococcus neoformans''
|}
 
==Fungi==
 
{|border="0"  width="200"
 
|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
 
|-
 
 
|align="center"|''Saccharomyces cerevisiae''
 
|align="center"|''Saccharomyces cerevisiae''
 
|}
 
|}

Revision as of 21:25, 18 March 2015

Genome-scale gene networks

Microbes

150px 150px 150px
Escherichia coli Cryptococcus neoformans Saccharomyces cerevisiae

Plant

150px 150px
Arabidopsis thaliana Oryza sativa

Animal

150px 150px
Caenorhabditis elegans Homo sapiens

RIDDLE: for network-assisted Gene Set Analysis

150px RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

MORPHIN: to study human diseases based on model organism pathways

150px Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.

JiffNet: to construct gene network for newly sequenced species

150px Jiffy (instant) gene network modeler for newly sequenced species