Difference between revisions of "Services"
(→Genome-scale functional gene networks) |
(→RIDDLE: For network-assisted Gene Set Analysis) |
||
| Line 34: | Line 34: | ||
|} | |} | ||
| − | ==''' | + | =='''Network-assisted Gene Set Analysis (human only)'''== |
[[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes. | [[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes. | ||
| + | |||
=='''MORPHIN: For the study of human diseases based on model organism pathways'''== | =='''MORPHIN: For the study of human diseases based on model organism pathways'''== | ||
[[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available. | [[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available. | ||
Revision as of 20:39, 21 October 2015
Organism-specific network-assisted hypothesis generation servers
Animal
|
|
|
|
| Mus musculus | Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens |
Plant
|
|
| Arabidopsis thaliana | Oryza sativa |
Microbe
|
|
|
| Escherichia coli | Saccharomyces cerevisiae | Cryptococcus neoformans |
Network-assisted Gene Set Analysis (human only)
RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
MORPHIN: For the study of human diseases based on model organism pathways
Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
JiffyNet: A gene network inference server for newly sequenced species
Jiffy (instant) gene network modeler for newly sequenced species
TRRUST: a reference database of human transcriptional regulatory interactions
TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
