Difference between revisions of "Services"

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__NOTOC__
 
__NOTOC__
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=='''Genome-scale gene networks for various species'''==
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=='''Co-functional networks: Organism-specific network-assisted hypothesis generation servers'''==
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[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]] For Yeast (''Saccharomyces cerevisiae''). Version 3 (5,818 genes, 362,512 links)
 
  
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[[file:Tools_WormNetLogo_ver3.png|150px|link=http://www.inetbio.org/wormnet]] For Worm (''Caenorhabditis elegans''). Version 3 (16,347 genes, 762,822 links)
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==''Animal''==
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{|border="0"  width="800"
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|align="center"|[[file:MouseNetLogo.png|150px|link=http://www.inetbio.org/mousenet]]
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|align="center"|[[file:WormNetv3.jpg|150px|link=http://www.inetbio.org/wormnet]]
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|align="center"|[[file:Flynet.png|150px|link=http://www.inetbio.org/flynet]]
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|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]]
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|-
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|align="center"|''Mus musculus''
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|align="center"|''Caenorhabditis elegans''
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|align="center"|''Drosophila melanogaster''
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|align="center"|''Homo sapiens''
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|}
  
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[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]] For Human (''Homo sapiens''). Version 1 (16,242 genes, 476,399 links)
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==''Plant''==
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{|border="0"  width="400"
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|align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]]
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|align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]]
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|-
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|align="center"|''Arabidopsis thaliana''
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|align="center"|''Oryza sativa''
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|}
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==''Microbe''==
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{|border="0"  width="600"
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|align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]]
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|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
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|align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]]
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|-
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|align="center"|''Escherichia coli''
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|align="center"|''Saccharomyces cerevisiae''
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|align="center"|''Cryptococcus neoformans''
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|}
  
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[[file:Tools_AraNetLogo.jpg|150px|link=http://www.functionalnet.org/aranet]] For Weed (''Arabidopsis thaliana''). Version 1 (19,647 genes, 1,062,222 links)
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=='''TRRUST: A reference database of human TF-target interactions'''==
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[[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
  
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[[file:Tools_RiceNetLogo.jpg|150px|link=http://www.functionalnet.org/ricenet]] For Rice (''Oryza sativa''). Version 1 (18,377 genes, 588,221 links)
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=='''MORPHIN: Network-assisted prediction of disease pathways in model organisms'''==
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[[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
  
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=='''RIDDLE: a network-assisted Gene Set Analysis server'''==
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=='''JiffyNet:Instant gene network building server for newly sequenced species'''==
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[[File:Riddle cover title.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
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[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
  
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=='''MORPHIN: to study human diseases based on model organism pathways'''==
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=='''RIDDLE: Network-assisted Gene Set Analysis (human only)'''==
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[[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
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=='''JiffNet: an instant network builder'''==
 
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[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) protein network modeler for newly sequenced species
 

Latest revision as of 12:34, 5 January 2016

Co-functional networks: Organism-specific network-assisted hypothesis generation servers

Animal

150px 150px 150px 150px
Mus musculus Caenorhabditis elegans Drosophila melanogaster Homo sapiens

Plant

150px 150px
Arabidopsis thaliana Oryza sativa

Microbe

150px 150px 150px
Escherichia coli Saccharomyces cerevisiae Cryptococcus neoformans

TRRUST: A reference database of human TF-target interactions

150px TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.

MORPHIN: Network-assisted prediction of disease pathways in model organisms

150px Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.

JiffyNet:Instant gene network building server for newly sequenced species

150px Jiffy (instant) gene network modeler for newly sequenced species

RIDDLE: Network-assisted Gene Set Analysis (human only)

150px RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

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