Difference between revisions of "Services"

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=='''Genome-scale gene networks for various species'''==
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=='''Co-functional networks: Organism-specific network-assisted hypothesis generation servers'''==
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==''Animal''==
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{|border="0"  width="800"
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|align="center"|[[file:MouseNetLogo.png|150px|link=http://www.inetbio.org/mousenet]]
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|align="center"|[[file:WormNetv3.jpg|150px|link=http://www.inetbio.org/wormnet]]
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|align="center"|[[file:Flynet.png|150px|link=http://www.inetbio.org/flynet]]
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|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]]
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|-
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|align="center"|''Mus musculus''
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|align="center"|''Caenorhabditis elegans''
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|align="center"|''Drosophila melanogaster''
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|align="center"|''Homo sapiens''
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|}
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==''Plant''==
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{|border="0"  width="400"
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|align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]]
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|align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]]
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|-
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|align="center"|''Arabidopsis thaliana''
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|align="center"|''Oryza sativa''
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|}
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==''Microbe''==
 
{|border="0"  width="600"
 
{|border="0"  width="600"
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|align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]]
 
|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
 
|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
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|align="center"|[[file:Tools_WormNetLogo_ver3.png|150px|link=http://www.inetbio.org/wormnet]]
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|align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]]
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|align="center"|[[file:Tools_AraNetLogo.jpg|150px|link=http://www.functionalnet.org/aranet]]
 
 
|-
 
|-
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|align="center"|''Escherichia coli''
 
|align="center"|''Saccharomyces cerevisiae''
 
|align="center"|''Saccharomyces cerevisiae''
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|align="center"|''Caenorhabditis elegans''
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|align="center"|''Cryptococcus neoformans''
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|align="center"|''Arabidopsis thaliana''
 
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|-
 
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|align="center"|''  ''
 
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|align="center"|''  ''
 
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|align="center"|''  ''
 
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|-
 
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|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannetn]]
 
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|align="center"|[[file:Tools_RiceNetLogo.jpg|150px|link=http://www.functionalnet.org/ricenet]]
 
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|-
 
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|align="center"|''Homo sapiens''
 
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|align="center"|''Oryza sativa''
 
 
|}
 
|}
  
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=='''RIDDLE: for network-assisted Gene Set Analysis'''==
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=='''TRRUST: A reference database of human TF-target interactions'''==
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[[File:Riddle cover title.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
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[[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
  
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=='''MORPHIN: to study human diseases based on model organism pathways'''==
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=='''MORPHIN: Network-assisted prediction of disease pathways in model organisms'''==
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[[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
  
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=='''JiffNet: to construct gene network for newly sequenced species'''==
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=='''JiffyNet:Instant gene network building server for newly sequenced species'''==
 
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
 
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
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=='''RIDDLE: Network-assisted Gene Set Analysis (human only)'''==
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[[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

Latest revision as of 12:34, 5 January 2016

Co-functional networks: Organism-specific network-assisted hypothesis generation servers

Animal

150px 150px 150px 150px
Mus musculus Caenorhabditis elegans Drosophila melanogaster Homo sapiens

Plant

150px 150px
Arabidopsis thaliana Oryza sativa

Microbe

150px 150px 150px
Escherichia coli Saccharomyces cerevisiae Cryptococcus neoformans

TRRUST: A reference database of human TF-target interactions

150px TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.

MORPHIN: Network-assisted prediction of disease pathways in model organisms

150px Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.

JiffyNet:Instant gene network building server for newly sequenced species

150px Jiffy (instant) gene network modeler for newly sequenced species

RIDDLE: Network-assisted Gene Set Analysis (human only)

150px RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

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