Difference between revisions of "Services"
From Bioinformatics Lab
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| − | ==''' | + | =='''Co-functional networks: Organism-specific network-assisted hypothesis generation servers'''== |
| − | {|border="0" width=" | + | |
| − | |align="center"|[[ | + | ==''Animal''== |
| − | |align="center"|[[file: | + | {|border="0" width="800" |
| − | |align="center"|[[ | + | |align="center"|[[file:MouseNetLogo.png|150px|link=http://www.inetbio.org/mousenet]] |
| + | |align="center"|[[file:WormNetv3.jpg|150px|link=http://www.inetbio.org/wormnet]] | ||
| + | |align="center"|[[file:Flynet.png|150px|link=http://www.inetbio.org/flynet]] | ||
| + | |align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]] | ||
|- | |- | ||
| − | |align="center"|'' | + | |align="center"|''Mus musculus'' |
|align="center"|''Caenorhabditis elegans'' | |align="center"|''Caenorhabditis elegans'' | ||
| − | |align="center"|'' | + | |align="center"|''Drosophila melanogaster'' |
| − | | | + | |align="center"|''Homo sapiens'' |
| − | |align="center"|[[ | + | |} |
| + | |||
| + | ==''Plant''== | ||
| + | {|border="0" width="400" | ||
| + | |align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]] | ||
|align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]] | |align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]] | ||
|- | |- | ||
| − | |align="center"|'' | + | |align="center"|''Arabidopsis thaliana'' |
|align="center"|''Oryza sativa'' | |align="center"|''Oryza sativa'' | ||
| + | |} | ||
| + | ==''Microbe''== | ||
| + | {|border="0" width="600" | ||
| + | |align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]] | ||
| + | |align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]] | ||
| + | |align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]] | ||
| + | |- | ||
| + | |align="center"|''Escherichia coli'' | ||
| + | |align="center"|''Saccharomyces cerevisiae'' | ||
| + | |align="center"|''Cryptococcus neoformans'' | ||
|} | |} | ||
| − | ==''' | + | =='''TRRUST: A reference database of human TF-target interactions'''== |
| − | [[File: | + | [[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes. |
| − | =='''MORPHIN: | + | =='''MORPHIN: Network-assisted prediction of disease pathways in model organisms'''== |
[[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available. | [[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available. | ||
| − | ==''' | + | =='''JiffyNet:Instant gene network building server for newly sequenced species'''== |
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species | [[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species | ||
| + | |||
| + | =='''RIDDLE: Network-assisted Gene Set Analysis (human only)'''== | ||
| + | [[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes. | ||
Latest revision as of 12:34, 5 January 2016
[edit] Co-functional networks: Organism-specific network-assisted hypothesis generation servers
[edit] Animal
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| Mus musculus | Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens |
[edit] Plant
|
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| Arabidopsis thaliana | Oryza sativa |
[edit] Microbe
|
|
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| Escherichia coli | Saccharomyces cerevisiae | Cryptococcus neoformans |
[edit] TRRUST: A reference database of human TF-target interactions
TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
[edit] MORPHIN: Network-assisted prediction of disease pathways in model organisms
Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
[edit] JiffyNet:Instant gene network building server for newly sequenced species
Jiffy (instant) gene network modeler for newly sequenced species
[edit] RIDDLE: Network-assisted Gene Set Analysis (human only)
RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
