Difference between revisions of "Services"

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__NOTOC__
 
__NOTOC__
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=='''Genome-scale gene networks for various species'''==
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=='''Co-functional networks: Organism-specific network-assisted hypothesis generation servers'''==
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{|border="0"  width="600"
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|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
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==''Animal''==
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|align="center"|[[file:Tools_WormNetLogo_ver3.png|150px|link=http://www.inetbio.org/wormnet]]
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{|border="0"  width="800"
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|align="center"|[[file:Tools_AraNetLogo.jpg|150px|link=http://www.functionalnet.org/aranet]]
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|align="center"|[[file:MouseNetLogo.png|150px|link=http://www.inetbio.org/mousenet]]
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|-
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|align="center"|[[file:WormNetv3.jpg|150px|link=http://www.inetbio.org/wormnet]]
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|align="center"|''Saccharomyces cerevisiae''
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|align="center"|[[file:Flynet.png|150px|link=http://www.inetbio.org/flynet]]
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|align="center"|''Caenorhabditis elegans''
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|align="center"|''Arabidopsis thaliana''
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|-
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|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]]
 
|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]]
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|align="center"|[[file:Tools_RiceNetLogo.jpg|150px|link=http://www.functionalnet.org/ricenet]]
 
 
|-
 
|-
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|align="center"|''Mus musculus''
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|align="center"|''Caenorhabditis elegans''
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|align="center"|''Drosophila melanogaster''
 
|align="center"|''Homo sapiens''
 
|align="center"|''Homo sapiens''
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|}
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==''Plant''==
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{|border="0"  width="400"
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|align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]]
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|align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]]
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|-
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|align="center"|''Arabidopsis thaliana''
 
|align="center"|''Oryza sativa''
 
|align="center"|''Oryza sativa''
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|}
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==''Microbe''==
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{|border="0"  width="600"
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|align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]]
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|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]]
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|align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]]
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|-
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|align="center"|''Escherichia coli''
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|align="center"|''Saccharomyces cerevisiae''
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|align="center"|''Cryptococcus neoformans''
 
|}
 
|}
  
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=='''RIDDLE: for network-assisted Gene Set Analysis'''==
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=='''TRRUST: A reference database of human TF-target interactions'''==
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[[File:Riddle cover title.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
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[[File:TRRUST_logo.jpg |150px|link=http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
  
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=='''MORPHIN: to study human diseases based on model organism pathways'''==
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=='''MORPHIN: Network-assisted prediction of disease pathways in model organisms'''==
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[[File:Logo morphin.png|150px|link=http://www.inetbio.org/morphin/]] Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
  
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=='''JiffNet: to construct gene network for newly sequenced species'''==
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=='''JiffyNet:Instant gene network building server for newly sequenced species'''==
 
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
 
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species
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=='''RIDDLE: Network-assisted Gene Set Analysis (human only)'''==
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[[File:Cover title riddle.jpg|150px|link=http://www.functionalnet.org/riddle]] RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

Latest revision as of 12:34, 5 January 2016

[edit] Co-functional networks: Organism-specific network-assisted hypothesis generation servers

[edit] Animal

MouseNetLogo.png WormNetv3.jpg Flynet.png Tools HumanNetLogo.jpg
Mus musculus Caenorhabditis elegans Drosophila melanogaster Homo sapiens

[edit] Plant

Aranet v2.jpg RiceNetv2 logo.png
Arabidopsis thaliana Oryza sativa

[edit] Microbe

EcoliNet.png Tools YesatNetLogo.jpg CryptoNet.png
Escherichia coli Saccharomyces cerevisiae Cryptococcus neoformans

[edit] TRRUST: A reference database of human TF-target interactions

TRRUST logo.jpg TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.

[edit] MORPHIN: Network-assisted prediction of disease pathways in model organisms

Logo morphin.png Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.

[edit] JiffyNet:Instant gene network building server for newly sequenced species

Jiffynetlogo4 small.jpg Jiffy (instant) gene network modeler for newly sequenced species

[edit] RIDDLE: Network-assisted Gene Set Analysis (human only)

Cover title riddle.jpg RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.

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