Difference between revisions of "People:SB Baek"

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===Seungbyn Baek===
 
===Seungbyn Baek===
 
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{|
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|[[File:Who.png|300px]]
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|[[File:SB pic.jpg|300px]]
 
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*'''Master's program student''' (2019~), Department of Biotechnology, Yonsei University
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*'''Ph.D program''' (2019~): Department of Biotechnology, Yonsei University
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*'''B.S.''' (2013-2017), Department of Biomedical Science, CHA University
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  E-mail: shlee354@gmail.com
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* '''Current research topic(s)'''
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*'''B.E.''' (2014-2017): Bio-Convergence, Underwood International College, Yonsei University
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** Human microbiota
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** Functional gene network of plant genome
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<pre>*E-mail : bsb0613(at)yonsei.ac.kr</pre>
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<br>
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* '''Hobby'''
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'''Research Interest'''
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** Bleeding-edge computer hardware
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* Single-cell ATAC-seq
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** Python, C++, R
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* Single-cell RNA-seq
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* Cancer Genomics
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* COVID-19 Immunology
 
|}
 
|}
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==Publications==
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* Randall T. Mertens*, Aditya Misra*, Peng Xiao*, '''Seungbyn Baek''', Joseph M. Rone, Davide Mangani, Kisha N. Sivanathan, Adedamola S. Arojojoye, Samuel G. Awuah, Insuk Lee, Guo-Ping Shi, Boryana Petrova, Jeannette R. Brook, Ana C. Anderson, Richard A. Flavell, Naama Kanarek, Martin Hemberg, Roni Nowarski**, A metabolic switch orchestrated by IL-18 and cGAMP programs intestinal tolerance,  '''''Immunity''''' 2024 Jun 19:S1074-7613(24)00305-4 [https://pubmed.ncbi.nlm.nih.gov/38906145/ PubMed]
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* Junha Cha*, Da Hee Kim*, Gamin Kim*, Jae-Won Cho, Euijeong Sung, '''Seungbyn Baek''', Min Hee Hong, Chang Gon Kim, Nam Suk Sim, Hyun Jun Hong, Jung Eun Lee, Martin Hemberg, Seyeon Park, Sun Ock Yoon, Sang-Jun Ha**, Yoon Woo Koh**, Hye Ryun Kim**, and Insuk Lee**, Single-cell analysis reveals cellular and molecular factors counteracting HPV-positive oropharyngeal cancer immunotherapy outcomes, '''''Journal for Immunotherapy of Cancer'''''. 2024 Jun 10;12(6):e008667 [https://pubmed.ncbi.nlm.nih.gov/38857913/ PubMed]
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* Wei E Gordon*, '''Seungbyn Baek*''', Hai P Nguyen, Yien-Ming Kuo, Rachael Bradley, Sarah L. Fong, Nayeon Kim, Alex Galazyuk, Insuk Lee, Melissa Ingala, Nancy B Simmons, Tony Schountz, Lisa Cooper, Ilias Georgakopoulos-Soares, Martin Hemberg**, Nadav Ahituv**, Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas '''''Nature Communications''''' 2024 Jan 9;15(1):12 [https://pubmed.ncbi.nlm.nih.gov/36824791/ PubMed]
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* '''Seungbyn Baek*''', Sunmo Yang, and Insuk Lee** COVID-GWAB: A Web-Based Prediction of COVID-19 Host Genes via Network Boosting of Genome-Wide Association Data '''''Biomolecules''''' 2022 Oct 12;12(10):1446 [https://pubmed.ncbi.nlm.nih.gov/36291657/ PubMed]
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* Chan Yeong Kim*, '''Seungbyn Baek*''', Junha Cha, Sunmo Yang, Eiru Kim, Edward M. Marcotte, Traver Hart, and Insuk Lee** HumanNet v3: An improved database of human gene networks for disease research '''''Nucleic Acids Research''''' 2022 Jan 7;50(D1):D632-D639 [https://pubmed.ncbi.nlm.nih.gov/34747468/ PubMed]
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* '''Seungbyn Baek*''', Insuk Lee** Single-cell ATAC sequencing analysis: from data preprocessing to hypothesis generation '''''Computational and Structural Biotechnology Journal''''' 2020 June 28;18:1429-1439 [https://pubmed.ncbi.nlm.nih.gov/32637041 Pubmed]

Latest revision as of 14:18, 24 June 2024

[edit] Seungbyn Baek

SB pic.jpg
  • Ph.D program (2019~): Department of Biotechnology, Yonsei University
  • B.E. (2014-2017): Bio-Convergence, Underwood International College, Yonsei University 
*E-mail : bsb0613(at)yonsei.ac.kr

Research Interest

  • Single-cell ATAC-seq
  • Single-cell RNA-seq
  • Cancer Genomics
  • COVID-19 Immunology

[edit] Publications

  • Randall T. Mertens*, Aditya Misra*, Peng Xiao*, Seungbyn Baek, Joseph M. Rone, Davide Mangani, Kisha N. Sivanathan, Adedamola S. Arojojoye, Samuel G. Awuah, Insuk Lee, Guo-Ping Shi, Boryana Petrova, Jeannette R. Brook, Ana C. Anderson, Richard A. Flavell, Naama Kanarek, Martin Hemberg, Roni Nowarski**, A metabolic switch orchestrated by IL-18 and cGAMP programs intestinal tolerance, Immunity 2024 Jun 19:S1074-7613(24)00305-4 PubMed
  • Junha Cha*, Da Hee Kim*, Gamin Kim*, Jae-Won Cho, Euijeong Sung, Seungbyn Baek, Min Hee Hong, Chang Gon Kim, Nam Suk Sim, Hyun Jun Hong, Jung Eun Lee, Martin Hemberg, Seyeon Park, Sun Ock Yoon, Sang-Jun Ha**, Yoon Woo Koh**, Hye Ryun Kim**, and Insuk Lee**, Single-cell analysis reveals cellular and molecular factors counteracting HPV-positive oropharyngeal cancer immunotherapy outcomes, Journal for Immunotherapy of Cancer. 2024 Jun 10;12(6):e008667 PubMed
  • Wei E Gordon*, Seungbyn Baek*, Hai P Nguyen, Yien-Ming Kuo, Rachael Bradley, Sarah L. Fong, Nayeon Kim, Alex Galazyuk, Insuk Lee, Melissa Ingala, Nancy B Simmons, Tony Schountz, Lisa Cooper, Ilias Georgakopoulos-Soares, Martin Hemberg**, Nadav Ahituv**, Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas Nature Communications 2024 Jan 9;15(1):12 PubMed
  • Seungbyn Baek*, Sunmo Yang, and Insuk Lee** COVID-GWAB: A Web-Based Prediction of COVID-19 Host Genes via Network Boosting of Genome-Wide Association Data Biomolecules 2022 Oct 12;12(10):1446 PubMed
  • Chan Yeong Kim*, Seungbyn Baek*, Junha Cha, Sunmo Yang, Eiru Kim, Edward M. Marcotte, Traver Hart, and Insuk Lee** HumanNet v3: An improved database of human gene networks for disease research Nucleic Acids Research 2022 Jan 7;50(D1):D632-D639 PubMed
  • Seungbyn Baek*, Insuk Lee** Single-cell ATAC sequencing analysis: from data preprocessing to hypothesis generation Computational and Structural Biotechnology Journal 2020 June 28;18:1429-1439 Pubmed
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