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=='''Genome-scale gene networks for various species'''== | =='''Genome-scale gene networks for various species'''== | ||
| − | {|border="0" width=" | + | ==Bacteria== |
| + | {|border="0" width="400" | ||
| + | |align="center"|[[File:EcoliNet.png|150px|link=http://www.inetbio.org/ecolinet]] | ||
| + | |align="center"|[[file:CryptoNet.png|150px|link=http://www.inetbio.org/cryptonet]] | ||
| + | |- | ||
| + | |align="center"|''Escherichia coli'' | ||
| + | |align="center"|''Cryptococcus neoformans'' | ||
| + | |} | ||
| + | ==Fungi== | ||
| + | {|border="0" width="200" | ||
|align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]] | |align="center"|[[File:Tools_YesatNetLogo.jpg|150px|link=http://www.inetbio.org/yeastnet]] | ||
| − | |align="center"| | + | |- |
| + | |align="center"|''Saccharomyces cerevisiae'' | ||
| + | |} | ||
| + | ==Plant== | ||
| + | {|border="0" width="400" | ||
|align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]] | |align="center"|[[File:Aranet_v2.jpg|150px|link=http://www.inetbio.org/aranet]] | ||
| + | |align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]] | ||
|- | |- | ||
| − | |||
| − | |||
|align="center"|''Arabidopsis thaliana'' | |align="center"|''Arabidopsis thaliana'' | ||
| − | | | + | |align="center"|''Oryza sativa'' |
| + | |} | ||
| + | ==Animal== | ||
| + | {|border="0" width="400" | ||
| + | |align="center"|[[file:WormNetv3.jpg|150px|link=http://www.inetbio.org/wormnet]] | ||
|align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]] | |align="center"|[[file:Tools_HumanNetLogo.jpg|150px|link=http://www.functionalnet.org/humannet]] | ||
| − | |||
| − | |||
|- | |- | ||
| + | |align="center"|''Caenorhabditis elegans'' | ||
|align="center"|''Homo sapiens'' | |align="center"|''Homo sapiens'' | ||
| − | |||
| − | |||
|} | |} | ||
Revision as of 17:42, 18 March 2015
Genome-scale gene networks for various species
Bacteria
|
|
| Escherichia coli | Cryptococcus neoformans |
Fungi
|
| Saccharomyces cerevisiae |
Plant
|
|
| Arabidopsis thaliana | Oryza sativa |
Animal
|
|
| Caenorhabditis elegans | Homo sapiens |
RIDDLE: for network-assisted Gene Set Analysis
RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
MORPHIN: to study human diseases based on model organism pathways
Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
JiffNet: to construct gene network for newly sequenced species
Jiffy (instant) gene network modeler for newly sequenced species
