Difference between revisions of "Services"
From Bioinformatics Lab
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=='''JiffyNet: A gene network inference server for newly sequenced species'''== | =='''JiffyNet: A gene network inference server for newly sequenced species'''== | ||
[[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species | [[File:Jiffynetlogo4 small.jpg |150px|link=http://www.jiffynet.org]] Jiffy (instant) gene network modeler for newly sequenced species | ||
| + | =='''TRRUST: a reference database of human transcriptional regulatory interactions'''== | ||
| + | [[File:TRRUST_logo.jpg |150px|link=http://http://www.grnpedia.org/trrust/]] TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes. | ||
Revision as of 11:11, 16 June 2015
Genome-scale functional gene networks
Animal
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| Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens |
Plant
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| Arabidopsis thaliana | Oryza sativa |
Microbe
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| Escherichia coli | Saccharomyces cerevisiae | Cryptococcus neoformans |
RIDDLE: For network-assisted Gene Set Analysis
RIDDLE (Reflective diffusion and local extension) is currently available for only human genes.
MORPHIN: For the study of human diseases based on model organism pathways
Morphin (Model Organisms Projected on a Human Integrated Gene Network) is currently available.
JiffyNet: A gene network inference server for newly sequenced species
Jiffy (instant) gene network modeler for newly sequenced species
TRRUST: a reference database of human transcriptional regulatory interactions
TRRUST (Transcriptional Regulatory relationships Unraveled by Sentence-based Text mining) is currently available for only human genes.
