Difference between revisions of "People:SB Baek"

Latest revision as of 13:25, 30 December 2024

[edit] Seungbyn Baek

Ph.D program (2019~): Department of Biotechnology, Yonsei University B.E. (2014-2017): Bio-Convergence, Underwood International College, Yonsei University *E-mail : bsb0613(at)yonsei.ac.kr Research Interest Single-cell ATAC-seq Single-cell RNA-seq Cancer Genomics COVID-19 Immunology

[edit] Publications

• Seungbyn Baek*, Euijeong Sung, Gamin Kim, Min-Hee Hong, Chang Young Lee, Hyo Sup Shim, Seong Yong Park**, Hye Ryun Kim**, Insuk Lee**, Single-cell multi-omics reveals tumor microenvironment factors underlying poor immunotherapy responses in ALK-positive lung cancer Cancer Communications In revision bioRxiv
• Seungbyn Baek*, Junha Cha, Min-Hee Hong, Gamin Kim, Yoon Woo Koh, Dahee Kim, Martin Hemberg, Seong Yong Park**, Hye Ryun Kim**, Insuk Lee**, Tumor microenvironment distinctions between esophageal cancer subtypes explain varied immunotherapy responses Under Review bioRxiv
• Euijeong Sung, Junha Cha, Seungbyn Baek, Insuk Lee**, Augmenting the human interactome for disease prediction through gene networks inferred from human cell atlas Under Review bioRxiv
• Chan Yeong Kim*, Dong Jin Park*, Beung Chul Ahn*, Seungbyn Baek, Min Hee Hong, Linh Thanh Nguyen, Sun Ha Hwang, Nayeon Kim, Daniel Podlesny, Askarbek Orakov, Christian Schudoma, Shahriyar Mahdi Robbani, Hyo Sup Shim, Hong In Yoon, Chang Young Lee, Seong Yong Park, Dongeun Yong, Mina Han, Peer Bork, Byoung Choul Kim**, Sang-Jun Ha**, Hye Ryun Kim**, Insuk Lee**, A conserved pilin from uncultured gut bacterial clade TANB77 enhances cancer immunotherapy, Nature Communications 2024 Dec 27;15:10726 PubMed
• Randall T. Mertens*, Aditya Misra*, Peng Xiao*, Seungbyn Baek, Joseph M. Rone, Davide Mangani, Kisha N. Sivanathan, Adedamola S. Arojojoye, Samuel G. Awuah, Insuk Lee, Guo-Ping Shi, Boryana Petrova, Jeannette R. Brook, Ana C. Anderson, Richard A. Flavell, Naama Kanarek, Martin Hemberg, Roni Nowarski**, A metabolic switch orchestrated by IL-18 and cGAMP programs intestinal tolerance, Immunity 2024 Jun 19:S1074-7613(24)00305-4 PubMed
• Junha Cha*, Da Hee Kim*, Gamin Kim*, Jae-Won Cho, Euijeong Sung, Seungbyn Baek, Min Hee Hong, Chang Gon Kim, Nam Suk Sim, Hyun Jun Hong, Jung Eun Lee, Martin Hemberg, Seyeon Park, Sun Ock Yoon, Sang-Jun Ha**, Yoon Woo Koh**, Hye Ryun Kim**, and Insuk Lee**, Single-cell analysis reveals cellular and molecular factors counteracting HPV-positive oropharyngeal cancer immunotherapy outcomes, Journal for Immunotherapy of Cancer. 2024 Jun 10;12(6):e008667 PubMed
• Wei E Gordon*, Seungbyn Baek*, Hai P Nguyen, Yien-Ming Kuo, Rachael Bradley, Sarah L. Fong, Nayeon Kim, Alex Galazyuk, Insuk Lee, Melissa Ingala, Nancy B Simmons, Tony Schountz, Lisa Cooper, Ilias Georgakopoulos-Soares, Martin Hemberg**, Nadav Ahituv**, Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas Nature Communications 2024 Jan 9;15(1):12 PubMed
• Seungbyn Baek*, Sunmo Yang, and Insuk Lee** COVID-GWAB: A Web-Based Prediction of COVID-19 Host Genes via Network Boosting of Genome-Wide Association Data Biomolecules 2022 Oct 12;12(10):1446 PubMed
• Chan Yeong Kim*, Seungbyn Baek*, Junha Cha, Sunmo Yang, Eiru Kim, Edward M. Marcotte, Traver Hart, and Insuk Lee** HumanNet v3: An improved database of human gene networks for disease research Nucleic Acids Research 2022 Jan 7;50(D1):D632-D639 PubMed
• Seungbyn Baek*, Insuk Lee** Single-cell ATAC sequencing analysis: from data preprocessing to hypothesis generation Computational and Structural Biotechnology Journal 2020 June 28;18:1429-1439 Pubmed