People:JE Shim

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Jung Eun Shim

  • Ph.D., Yonsei Univ., Dept of Computer Science (03/2003 - 08/2008).

Dissertation: 2-DE Gel based Proteome Analysis Methods for Identification of Differentially Expressed Proteins

  • M.S., Yonsei Univ., Dept of Computer Science (03/2001 - 02/2003).

Thesis: A landmark extraction method for the protein 2DE images

Current Research Interests

  • Datamining, Bioinformatics, OLAP, Clustering


  • Yienah Jin, Jung Eun Shim, Won Suk Lee, "A Probability-based Error Spot Filtering Method in Protein 2-DE Image Spot Pattern matching analysis", Expert Systems with Applications, (2011, accept).
  • Insuk Lee, U. Martin Blom, Peggy I. Wang, Jung Eun Shim, Edward M. Marcotte, "Prioritizing candidate disease genes by network-based boosting of genome-wide association data", Genome Research, (2011, in press).
  • Jung Eun Shim, Dan Bi Kim, Won Suk Lee, Sang Yun Cho, Eunsil Yu, “Exception Discovery: A Novel Method for the Identification of Differentially Expressed Proteins”, IEEE transactions on information technology in biomedicine, (2010) 14(2): 473-480.
  • Jung Eun Shim, Won Suk Lee, "On-line Analytical Framework for the 2-DE based Proteome Information", Expert Systems with Applications, (2009) 36: 7528–7534.
  • Jung Eun Shim, Won Suk Lee, "A landmark extraction method for protein 2DE gel images based on multi-dimensional clustering", Artificial Intelligence in Medicine (2005) 35: 157-170.
  • Sang Yun Cho, Kang-Sik Park, Jung Eun Shim, Min-Seok Kwon, Kil Hong Joo, Won Suk Lee, Joon Chang, Hoguen Kim, Hyun Cheol Chung, Hyun Ok Kim, Young-Ki Paik, "An integrated proteome database for two-dimensional electrophoresis data analysis and laboratory information management system", Proteomics, (2002) 2(9): 1104-13.
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