Difference between revisions of "Web Resources"

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(Phenome/Metabolome)
(Genotype-to-phenotype map)
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== Genotype-to-phenotype map ==
 
== Genotype-to-phenotype map ==
 
*[http://www.genome.gov/gwastudies/ GWAS catalog]
 
*[http://www.genome.gov/gwastudies/ GWAS catalog]
 +
*[http://distild.jensenlab.org/ DistiLD] Diseases and Traits in Linkage Disequilibrium Blocks
 
*[http://www.personalgenomes.org/ Personal Genome Project]
 
*[http://www.personalgenomes.org/ Personal Genome Project]
  

Revision as of 15:50, 19 August 2011

Contents

Variome

Transcriptome

Proteome/Localisome

  • SUBA SUBcellular location DB for Arabidopsis proteins

Phenome/Metabolome

  • OMIM Human disease DB
  • ICD International Classification of Disease by WHO
  • GenomeRNAi A Phenotype DB for large-scale RNAi screens (human, mouse, fly, worm...)
  • cloroplast2010 Phenome/metabolome DB for Arabidopsis clroloplast gene KO lines (by MSU)

Genotype-to-phenotype map

Interactome/Network

TF/miRNA/Regulaorty network

Chemical/Drug/Drug network

  • PubChem
  • STITCH DB for known and predicted chemical-protein interaction

Ontology/Pathway

Bacterial genomes

Fungal genomes

Animal genomes

Plant genomes

Metagenomes

  • CAMERA 2.0 Curated DB and analysis tool for metagenomes

Others

  • GOLD Genome Online Database-Genome project statistics and download links
  • CAGI Critical Assessment of Genome Interpretation
  • nightscience Collective creativity in scientific discovery games
Personal tools
Namespaces

Variants
Actions
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