Difference between revisions of "Web Resources"

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*[http://stitch.embl.de/ STITCH] DB for known and predicted chemical-protein interaction
 
*[http://stitch.embl.de/ STITCH] DB for known and predicted chemical-protein interaction
 
*[http://ctd.mdibl.org/ CTD]
 
*[http://ctd.mdibl.org/ CTD]
*[http://stitch.embl.de/cgi/show_input_page.pl STITCH]
 
 
*[http://drugbank.ca/ Drugbank]
 
*[http://drugbank.ca/ Drugbank]
  

Revision as of 19:55, 29 September 2011

Contents

Ontology/Pathway

Variome

Transcriptome

Proteome/Localisome

  • SUBA SUBcellular location DB for Arabidopsis proteins

Phenome/Metabolome

  • OMIM Human disease DB
  • ICD International Classification of Disease by WHO
  • GenomeRNAi A Phenotype DB for large-scale RNAi screens (human, mouse, fly, worm...)
  • cloroplast2010 Phenome/metabolome DB for Arabidopsis clroloplast gene KO lines (by MSU)

Genotype-to-phenotype map

Interactome/Network

TF/miRNA/Regulaorty network

Chemical/Drug/Drug network


Animal genomes

Plant genomes

Metagenomes

  • CAMERA 2.0 Curated DB and analysis tool for metagenomes
  • NCBI Metagenome DB Categorized with metagenome types, sources and sequencing methods.

Other genomes

Other resources

  • GOLD Genome Online Database-Genome project statistics and download links
  • CAGI Critical Assessment of Genome Interpretation
  • nightscience Collective creativity in scientific discovery games
Personal tools
Namespaces

Variants
Actions
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Toolbox