Difference between revisions of "Favorite Knowledgebase"
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== | == Variome == | ||
*[http://www. | |||
== Transcriptome == | |||
*[http://www.ncbi.nlm.nih.gov/geo/ GEO] | |||
*[http://www.ebi.ac.uk/arrayexpress/ Arrayexpress] | |||
== Proteome == | |||
== Metabolome == | |||
== Phenome == | |||
*[http://www.ncbi.nlm.nih.gov/omim OMIM] | |||
== Genotype-to-phenotype map == | |||
*[http://www.genome.gov/gwastudies/ GWAS catalog] | |||
== Interactome/Network == | |||
*[http://code.google.com/p/psicquic/ Protemic Standard Initiative Common QUery InterfaCe (PSICQUIC)] | |||
*[http://www.imexconsortium.org/ International Molecular Exchange Consortium (IMEx)] | |||
*[http://www.hprd.org/ Human Protein Reference Database (HPRD)] | |||
== TF/miRNA == | |||
== Chemical/Drug == | |||
*[http://pubchem.ncbi.nlm.nih.gov/ PubChem] | |||
== Ontology/Pathway == | |||
*[http://www.geneontology.org/ Gene Ontology] | |||
*[http://biocyc.org/ Biocyc] | |||
== Bacterial genomes == | |||
*[http://www.pseudomonas.com/ Pseudomonas Genome Database] | |||
== Fungal genomes == | |||
*[http://www.yeastgenome.org/ Saccharomyces Genome Database] | |||
*[http://www.candidagenome.org/ Candida Genome Database] | |||
== Animal genomes == | |||
*[http://www.wormbase.org/ WormBase] | |||
*[http://flybase.org/ FlyBase] | |||
*[http://www.informatics.jax.org/ MGI] | |||
== Plant genomes == | |||
*[http://5e.plantphys.net/index.php Plant Physiology web] | |||
*[http://www.arabidopsis.org/ TAIR] | |||
*[http://www.gramene.org/ Gramene] | |||
*[http://www.maizegdb.org/ MaizeGDB] | |||
== Metagenomes == | |||
== Stem Cells == | |||
== Others == | |||
Latest revision as of 16:55, 23 July 2011
Variome
Transcriptome
Proteome
Metabolome
Phenome
Genotype-to-phenotype map
Interactome/Network
- Protemic Standard Initiative Common QUery InterfaCe (PSICQUIC)
- International Molecular Exchange Consortium (IMEx)
- Human Protein Reference Database (HPRD)