Difference between revisions of "Journal Club"

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|[http://www.sciencemag.org/content/333/6042/601.full Evidence for network evolution in an arabidopsis interactome Map]
 
|[http://www.sciencemag.org/content/333/6042/601.full Evidence for network evolution in an arabidopsis interactome Map]
 
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|rowspan = "2" |September 5 Mon, 2011
 
|SG Ji
 
|SG Ji

Revision as of 14:02, 5 September 2011

*** October 19 Mon, 2011 TY Oh independently evolved virulence effectors converge onto hubs in a plant immune system Network
Evidence for network evolution in an arabidopsis interactome Map
September 5 Mon, 2011 SG Ji Exome Sequencing of Ion Channel Genes Reveals Complex Profiles Confounding Personal Risk Assessment in Epilepsy
SH Hwang Pluripotency factors in Embryonic stem cells Regulate Differentiation into Germ Layers
August 22 Mon, 2011 ER Kim Integrated Genome-scale predition of Detrimental Mutations in Transcription Networks
T Lee From expression QTLs to personalized transcriptomics
June 20 Mon, 2011 JH Shin a user's guide to the encyclopedia of DNA elements(ENCODE)
May 30 Mon, 2011 HH Kim enterotypes of the human gut microbiome
toward molecular trait-based ecology, through intergration of biogeochemical, geographical and metagenomic data
May 16 Mon, 2011 AR Cho variable pathogenicity determines individual lifespan in caenorhabditis elegans
a high-resolution c.elegans essential gene network based on phenotypic profiling of a complex tissue
April 25 Mon, 2011 S Beck Hallmarks of Cancer : The next generation
Mapping Cancer Origins
Genetic Interactions in Cancer Progression and Treatment
April 11 Mon, 2011 JE Shim Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology
T Lee ***Changed!***

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

March 28 Mon, 2011 TY Oh profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis
cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control
March 14 Mon, 2011 JW Song phenotypic landscape of a bacterial cell
cross-species chemogenomic profiling reveals evolutionarily conserved drug mode of action
February 28 Mon, 2011 KS Kim genomic patterns of pleiotropy and the evolution of complexity
HJ Han simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway
February 21 Mon, 2011 MH Lee dynamic interaction networks in a hierarchically organized tissue
February 14 Mon, 2011 AR Cho rewiring of genetic networks in response to DNA damage
January 31 Mon, 2011 JW Song Applying mass spectrometry-based proteomics to genetics, genomics and network biology
Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics
December 27 Mon, 2010 ER Kim Functional_roles_fornoise_in_genetic_circuits
T Lee Estimation_of_effect_size_distribution_from_genome-wide_association_studies_and_implications_for_future_discoveries
November 15 Mon, 2010 AR Cho Liver_and_Adipose_Expression_associated_SNPs_are_enriched_for_association_to_type_2_diabetes
SG Ji It's_the_machine_that_matters:_predicting_gene_function_and_phenotype_from_protein_networks
November 1 Mon, 2010 HH Kim A_genome-wide_map_of_human_genetic_interactions_inferred_from_radiation_hybrid_genotypes
JH Shin A_Genome-Wide_Gene_Function_Prediction_Resource_for_Drosophila_melanogaster
October 11 Mon, 2010 JE Shim Dissecting_spatio-temporal_protein_networks_driving_human_heart_development_and_related_disorders
September 13 Mon, 2010 SH Hwang Transposable_elements_have_rewired_the_core_regulatory_network_of_human_embryonic_stem_cells

Limits_of_sequence_and_functional_conservation

May 26 Wed, 2010 AR Cho network_based_elucidation_of_human_disease_similarities_reveals_common_functional_modules_enriched_for_pluripotent_drug_targets.pdf
May 19 Wed, 2010 SG Ji interpreting_metabolomic_profiles_using_unbiased_pathway_models.pdf
April 21 Wed, 2010 JH Shin identification_of_networks_of_co_occurring_tumor_related_dna_copy_number_changes_using_a_genome_wide_scoringapproach.pdf
April 14 Wed, 2010 TY Oh an_atlas_of_combinatorial_transcriptional_regulation_in_mouse_and_man
April 7 Wed, 2010 HHkim

systematic_discovery_of_nonobvious_human_disease_models_through_orthologous_phenotypes

T Lee

genome_side_association_study_of_107_phenotypes_in_Arabidopsis_thaliana_inbred_lines

Mar 31 Wed, 2010 JE Shim toward_stem_cell_systems_biology_from_molecules_to_networks_and_landscapes.pdf

systems_biology_of_stem_cell_fate_and_cellular_reprogramming

Mar 24 Wed, 2010 SH Hwang dynamic_modularity_in_protein_interaction_networks_predicts_breast_cancer_outcome
Jan 18 Mon, 2010 TY Oh(T Lee) JournalClub_100118_a_tutorial_on_statistical_methods_for_population_association_studies
Jan 16 Sat, 2010 JE Shim(MH Lee) systems-level_dinamic_analyses_of_fate_change_in_murine_embryonic_stem_cells
Jan 15 Fri, 2010 SG Ji distinguishing_direct_versus_indirect_transcription_factor-DNA-interactions
Jan 14 Thu, 2010 HH kim chemogenomic_profiling_predicts_antifungal_synergies
Jan 13 Wed, 2010 JH Shin(ER Kim) edgetic_perturbation_models_of_human_inherited_disorders
Jan 12 Tue, 2010 TY Oh(T Lee) analysis_of_cell_fate_from_single-cell_gene_expression_profiles_in_C.elegans
Jan 11 Mon, 2010 JE Shim(MH Lee) predicting_new_molecular_targets_for_known_drugs.pdf

Reference:SEA(Similarity Ensemble Approach)

Jan 09 Sat, 2010 SG Ji harnessing_gene_expression_to_identify_the_genetic_basis_of_drug_resistance
Jan 08 Fri, 2010 AR Cho an_integrative_approach_to_reveal_driver_gene_fusions_from_paired_end_sequencing_data_in_cancer
Jan 07 Thu, 2010 HH Kim a_phenotypic_profile_of_the_candida_albicans_regulatory_network
Jan 06 Wed, 2010 JH Shin(ER Kim) a_global_view_of_protein_expression_in_human_cells_tissues_and_organs
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