Difference between revisions of "Journal Club"

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|[http://www.cell.com/abstract/S0092-8674(11)00296-0 Mapping Cancer Origins]
 
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Revision as of 14:03, 5 April 2011

April 25 Mon, 2011 S Beck Hallmarks of Cancer : The next generation
Mapping Cancer Origins
Genetic Interactions in Cancer Progression and Treatment
*** April 11 Mon, 2011 JE Shim Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology
T Lee ***Changed!***

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

March 28 Mon, 2011 TY Oh profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis
cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control
March 14 Mon, 2011 JW Song phenotypic landscape of a bacterial cell
cross-species chemogenomic profiling reveals evolutionarily conserved drug mode of action
February 28 Mon, 2011 KS Kim genomic patterns of pleiotropy and the evolution of complexity
HJ Han simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway
February 21 Mon, 2011 MH Lee dynamic interaction networks in a hierarchically organized tissue
February 14 Mon, 2011 AR Cho rewiring of genetic networks in response to DNA damage
January 31 Mon, 2011 JW Song Applying mass spectrometry-based proteomics to genetics, genomics and network biology
Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics
December 27 Mon, 2010 ER Kim Functional_roles_fornoise_in_genetic_circuits
T Lee Estimation_of_effect_size_distribution_from_genome-wide_association_studies_and_implications_for_future_discoveries
November 15 Mon, 2010 AR Cho Liver_and_Adipose_Expression_associated_SNPs_are_enriched_for_association_to_type_2_diabetes
SG Ji It's_the_machine_that_matters:_predicting_gene_function_and_phenotype_from_protein_networks
November 1 Mon, 2010 HH Kim A_genome-wide_map_of_human_genetic_interactions_inferred_from_radiation_hybrid_genotypes
JH Shin A_Genome-Wide_Gene_Function_Prediction_Resource_for_Drosophila_melanogaster
October 11 Mon, 2010 JE Shim Dissecting_spatio-temporal_protein_networks_driving_human_heart_development_and_related_disorders
September 13 Mon, 2010 SH Hwang Transposable_elements_have_rewired_the_core_regulatory_network_of_human_embryonic_stem_cells

Limits_of_sequence_and_functional_conservation

May 26 Wed, 2010 AR Cho network_based_elucidation_of_human_disease_similarities_reveals_common_functional_modules_enriched_for_pluripotent_drug_targets.pdf
May 19 Wed, 2010 SG Ji interpreting_metabolomic_profiles_using_unbiased_pathway_models.pdf
April 21 Wed, 2010 JH Shin identification_of_networks_of_co_occurring_tumor_related_dna_copy_number_changes_using_a_genome_wide_scoringapproach.pdf
April 14 Wed, 2010 TY Oh an_atlas_of_combinatorial_transcriptional_regulation_in_mouse_and_man
April 7 Wed, 2010 HHkim

systematic_discovery_of_nonobvious_human_disease_models_through_orthologous_phenotypes

T Lee

genome_side_association_study_of_107_phenotypes_in_Arabidopsis_thaliana_inbred_lines

Mar 31 Wed, 2010 JE Shim toward_stem_cell_systems_biology_from_molecules_to_networks_and_landscapes.pdf

systems_biology_of_stem_cell_fate_and_cellular_reprogramming

Mar 24 Wed, 2010 SH Hwang dynamic_modularity_in_protein_interaction_networks_predicts_breast_cancer_outcome
Jan 18 Mon, 2010 TY Oh(T Lee) JournalClub_100118_a_tutorial_on_statistical_methods_for_population_association_studies
Jan 16 Sat, 2010 JE Shim(MH Lee) systems-level_dinamic_analyses_of_fate_change_in_murine_embryonic_stem_cells
Jan 15 Fri, 2010 SG Ji distinguishing_direct_versus_indirect_transcription_factor-DNA-interactions
Jan 14 Thu, 2010 HH kim chemogenomic_profiling_predicts_antifungal_synergies
Jan 13 Wed, 2010 JH Shin(ER Kim) edgetic_perturbation_models_of_human_inherited_disorders
Jan 12 Tue, 2010 TY Oh(T Lee) analysis_of_cell_fate_from_single-cell_gene_expression_profiles_in_C.elegans
Jan 11 Mon, 2010 JE Shim(MH Lee) predicting_new_molecular_targets_for_known_drugs.pdf

Reference:SEA(Similarity Ensemble Approach)

Jan 09 Sat, 2010 SG Ji harnessing_gene_expression_to_identify_the_genetic_basis_of_drug_resistance
Jan 08 Fri, 2010 AR Cho an_integrative_approach_to_reveal_driver_gene_fusions_from_paired_end_sequencing_data_in_cancer
Jan 07 Thu, 2010 HH Kim a_phenotypic_profile_of_the_candida_albicans_regulatory_network
Jan 06 Wed, 2010 JH Shin(ER Kim) a_global_view_of_protein_expression_in_human_cells_tissues_and_organs
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