Difference between revisions of "Software"
From Bioinformatics Lab
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|align="center"|[[File:Maizenet_logo_4th.png|150px|link=http://www.inetbio.org/maizenet]] | |align="center"|[[File:Maizenet_logo_4th.png|150px|link=http://www.inetbio.org/maizenet]] | ||
|align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]] | |align="center"|[[file:RiceNetv2 logo.png|150px|link=http://www.inetbio.org/ricenet]] | ||
| + | |align="center"|[[File:WheatNet_logo.png|150px|link=http://www.inetbio.org/wheatnet]] | ||
|align="center"|[[File:Soynetlogo.png|150px|link=http://www.inetbio.org/soynet]] | |align="center"|[[File:Soynetlogo.png|150px|link=http://www.inetbio.org/soynet]] | ||
|align="center"|[[File:Tomatonet_logo.png|150px|link=http://www.inetbio.org/tomatonet]] | |align="center"|[[File:Tomatonet_logo.png|150px|link=http://www.inetbio.org/tomatonet]] | ||
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|align="center"|''Arabidopsis thaliana'' | |align="center"|''Arabidopsis thaliana'' | ||
|align="center"|''Zea mays'' | |align="center"|''Zea mays'' | ||
|align="center"|''Oryza sativa'' | |align="center"|''Oryza sativa'' | ||
| + | |align="center"|''Triticum aestivum'' | ||
|align="center"|''Glycine max'' | |align="center"|''Glycine max'' | ||
|align="center"|''Solanum lycopersicum'' | |align="center"|''Solanum lycopersicum'' | ||
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Revision as of 13:55, 1 August 2017
Co-functional networks and hypothesis generation servers
Human and Animal models
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| Homo sapiens | Mus musculus | Danio rerio | Drosophila melanogaster | Caenorhabditis elegans |
Plants
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| Arabidopsis thaliana | Zea mays | Oryza sativa | Triticum aestivum | Glycine max | Solanum lycopersicum |
Fungi
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| Saccharomyces cerevisiae | Cryptococcus neoformans |
Bacteria
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| Pseudomonas aeruginosa | Escherichia coli | Xanthomonas oryzae pv. oryzae |
Build your co-functional networks for all other species
JiffyNet: Instant gene network building server for newly sequenced species
Network-based servers for Disease Research
COEXPEDIA: Exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH)
GWAB: A web server for network-based boosting of human genome-wide association data
MUFFINN: Cancer gene discovery via network analysis of somatic mutation data
MORPHIN: Network-assisted prediction of disease pathways in model organisms
Other Network Biology tools
TRRUST: A reference database of human TF-target interactions
RIDDLE: Network-assisted Gene Set Analysis (human only)
